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https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/RNASeq_Module2_IGV_Tutorial_Brief.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/RNASeq_Module3_AbundanceEstimation_DifferentialExpression.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/RNASeq_Module3_AbundanceEstimation_DifferentialExpression.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/SeqTech22_Data_Exploration.ipynb
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/SeqTech_2022_SingCell_protocol.docx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/SeqTech_2022_SingCell_protocol.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/Taylor_202201118_variants_T2T.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/Taylor_202201118_variants_T2T.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/Wagner_VariantRepresentation,Annotation,andInterpretation.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/Wagner_VariantRepresentation,Annotation,andInterpretation.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/Zody_Sequencing_2022.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/cshl_bisulfite_2022.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/full/cshl_bisulfite_2022.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_01_01_FASTA_FASTQ_GTF.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_01_01_FASTA_FASTQ_GTF.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_01_02_Indexing.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_01_02_Indexing.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_01_Alignment.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_01_Alignment.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_02_Alignment_vs_Assembly_vs_Kmer.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_02_Alignment_vs_Assembly_vs_Kmer.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_03_SAM_BAM_BED.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_03_SAM_BAM_BED.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_04_alignmentQC.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_02_04_alignmentQC.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_03_01_AbundanceEstimation.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_03_01_AbundanceEstimation.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_03_02_HTSEQ.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_03_02_HTSEQ.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_03_03_DifferentialExpression.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_03_03_DifferentialExpression.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_04_01_AlignmentFreeKallisto.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_04_01_AlignmentFreeKallisto.pptx
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_05_01_AlternativeSplicingAnalysis.pdf
https://54.71.55.4/rnaseq-tutorial/lectures/cshl/2022/mini/RNASeq_MiniLecture_05_01_AlternativeSplicingAnalysis.pptx
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/copycat_wgs/plots/normal.gccontent.lib1.readLength100.pdf
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/copycat_wgs/plots/tumor.gccontent.lib1.readLength100.pdf
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/alignmentStats.xml
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/chromDepth.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/edgeRuntimeLog.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/svLocusGraph.bin
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/alignmentStatsSummary.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/candidateSV.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/candidateSV.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/candidateSmallIndels.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/candidateSmallIndels.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/diploidSV.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/diploidSV.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/somaticSV.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/somaticSV.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/svCandidateGenerationStats.tsv
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/svCandidateGenerationStats.xml
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/stats/svLocusGraphStats.tsv
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/candidateSV.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/candidateSV.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/candidateSmallIndels.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/candidateSmallIndels.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/diploidSV.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/diploidSV.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/somaticSV.vcf.gz
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/results/variants/somaticSV.vcf.gz.tbi
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/logs/pyflow_log.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/logs/pyflow_tasks_stderr_log.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/logs/pyflow_tasks_stdout_log.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/state/make_pyflow_task_graph.py
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/state/pyflow_tasks_info.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/state/pyflow_tasks_runstate.txt
https://54.71.55.4/pmbio-workshop/results/chr6_and_chr17/somatic/manta_wgs/workspace/pyflow.data/state/backup/pyflow_tasks_info.txt.backup_before_starting_run_53666_1.txt